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Random Jungle 2 is the same as Random Jungle 2.0.0 (archived) except that some TiTo defaults are different.

Random Jungle

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Random Jungle Sparse uses less memory than Random Jungle, but data should only use the values of 0, 1, 2, and 3 for missing code.

Usage

Random Jungle and Random Jungle Sparse have a large number of command line parameters; see Section 3.1 of the program documentation, RandomJungleManual.pdf.

Example Data

Test data can be found at:

Community Data ? iplantcollaborative ? example_data ? randomjungle ? input

Results using the parameter file including with the relevant input files can be found at:

Community Data ? iplantcollaborative ? example_data ? randomjungle ? output

Command-line options to generate the output files are found in run.log and run2.log which are found among the other output files.

Tool Source

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Binary

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^Random_Jungle_1.3.tar.gz^Random_Jungle_1.3_mpi.tar.gzAll versions^rjwrapper.py

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Source

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All versions

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Version

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1.3.0

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User Guide

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RandomJungleManual.pdf and RandomJunglePaper.pdf

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Requires

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N/A

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JSON

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