Include Page | ||||
---|---|---|---|---|
|
BEDTools groupBy
Community rating: ?????
Summarizes a dataset column based upon common column groupings. Akin to the SQL "group by" command
Quick Start
- To use BEDTools groupBy, import your data in BED format.
- Resources: http://code.google.com/p/bedtools/
Test Data
Info |
---|
Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> Bedtools. |
Input File(s)
Use b.bed from the directory above as test input.
Parameters Used in App
When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.
- Use these parameters within the DE app interface:
- column should be summarized - 5
Output File(s)
Expect bedtools_groupby_output as output.
Tool Source for App
...