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Blastp of a subset of uniprot

Community rating: ?????BLASTp UniProt


Creates a blast database for a selected subset of the Uniprot database, and then runs Blastp against it. Intended for annotation of a transcriptome.

Quick Start

Test Data


Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> blastp.

Input File(s)

Use BAtestpep.fa (query ) from the directory above as test input.

Parameters Used in App

When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.


For the test case, the output file you will find in the example_data directory is named blastp_out.txt

Tool Source for App