Items in PURPLE and links are the things you must modify. Change PURPLE items to BLACK when you save your page.
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Linux stream editor
Community rating: ?????
A general Linux tool for text editing and file reformatting. Otherwise known as sed.
Quick Start
- To use Linux stream editor, import your data in ___ formatany linux text format.
- Resources: http://replacewww.with.URL.for.tool.documentation.from.the.tool.source.orggrymoire.com/Unix/Sed.html
Test Data
| Info |
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Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> directory. linux_stream_editor |
Input File(s)
Use TerriblyIncomprehensible.txt and HorriblyWritten.txt from testtranscripts.fa from the directory above as test input.
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When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.
Use either the "Default parameters..." section OR fill in the "Use these parameters..." section. Delete the unused section and the OR. Then, delete this note.
- Default parameters only, no further configuration needed.
OR
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The program to enter for sed is:
s/ /_/g
Output File(s)
Expect a text file named after the input files as output. For the test case, the output file you will find in the example_data directory is named BeautifulProse.txt.The output file for the test data is testtranscripts2.fa
Tool Source for App
- http://replacewww.with.URL.for.tool.orggrymoire.com/Unix/Sed.html