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Trims reads initialized with HTProcess_fastqc for quality control, and runs fastqc on them again.


  • To use HTProcess_trimmomatic_-0.3233, import your data from the output of HTProcess_fastqc-0.12, or HTProcess-prepare_directories_and_run_fastqc-0.2. The input is a directory named HTProcess_reads.
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Use the output directory, HTProcess_READS, from HTProcess_fastqc-0.12 from the directory above as test input.