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- To use Pre-Process Reads, import your data in fastq format.
- Resources: httphttps://codegithub.google.com/pjts/ngopt/sga
Test Data
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Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> PreProcess_Reads. |
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Expect a fastq file named according to the input name. For the test case, the output file you will find in the example_data directory is named frag_pr_preproc.fq.