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BLAT_psl_to_SAM
### BLAT_psl_to_SAM
> ####
Description and Quick Start
>> This is a script to convert psl files produced by BLAT into the SAM file format. No real quality scores are entered.> ####
Test Data
>> /iplant/home/shared/iplantcollaborative/example_data/Blat_psl2sam> ####
Input File(s)
>> Input a PSL file from BLAT> ####
Parameters Used in App
>> No options are recommended. Don''t use these unless you wrote the script!> ####
Output File(s)
>> A SAM file. Probably no header.
References