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{hidden-data}Content COMPLETE as of 31 Oct 2011 for 0.6.{hidden-data} |
Compute Contig Statistics
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Expect a txt file as output.
Header | Description |
|---|---|
count | Count of sequences in fasta file |
sum_len | Total length of sequences |
N50 | Sequences of the N50 length and greater together account for 50% of the total length of sequences in the file |
min_len | Length of shortest sequence |
max_len | Length of longest sequence |
med_len | Median length of sequences |
ave_len | Mean length of sequences |
sd_len | Standard deviation of the mean |
file | File name (e.g. SperuDNc5I100-sample.fa) |
Tool Source for App
- Not applicable