Items in PURPLE and links are the things you must modify. Change PURPLE items to BLACK when you save your page.
gbsMergeSNP_TASSEL 3.0.133
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Community rating: ?????
Merges all .tbt.bin and/or (preferably) .tbt.byte files present in the input directory and all of its subdirectories.
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- To use gbsMergeSNP_TASSEL 3.0.133, import your data in ___ format Hapmap and TBT format.
- Resources: http://replace.with.URL.for.tool.documentation.from.the.tool.source.org Genotype-by-Sequencing
Test Data
Info |
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Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> gbs_workflow -> directoryoutput. |
Input File(s)
Use TerriblyIncomprehensible.txt and HorriblyWritten.txt from unfilt and mergedTBT from the directory above as test input.
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When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.Use either the "Default parameters..." section OR fill in the "Use these parameters..." section. Delete the unused section and the OR. Then, delete this note.
- Default parameters only, no further configuration needed.
OR
- Use these parameters within the DE app interface:
- parameter name - value/setting parameter name - value/setting
Output File(s)
Expect a text file named after the input files as a folder of text files as output. For the test case, the output file folder you will find in the example_data directory is named BeautifulProse.txtnamed mergedSNP.