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MUSCLE stands for MUltiple Sequence Comparison by Log- Expectation. MUSCLE may achieve both better average accuracy and better speed than ClustalW2 or T-Coffee, depending on the chosen options.
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This documentation corresponds to the DE app named "MUSCLE-hpc-3.8.31", which runs on the Stampede supercomputer. See MUSCLE for documentation of the app "Muscle-3.8.31", which runs on the UA HTCondor cluster. These two apps can be used interchangeably. Wait times may be shorter for Muscle-3.8.31. |
Quick Start
- To use MUSCLE, upload your data in FASTA format.
- Resources: documentation
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