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BWA index 0.7.4 

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Info

Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> bwa-mem -> inputs

Input File(s)

Use BAgenome41BAgenomeRay41.fa from the directory above as test input.

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  • Default parameters only, no further configuration needed.

Output File(s)

Expect a files named after the input file as output. For the test case, the output file you will find in the example_data directory is named BeautifulProse.txtBAgenomeRay41.fa.64.amb, BAgenomeRay41.fa.64.ann, BAgenomeRay41.fa.64.bwt, BAgenomeRay41.fa.64.pac, and BAgenomeRay41.fa.64.sa.

Tool Source for App