GWAS Tools
What are GWAS Tools?
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Further Information
Introduction to SNPs: httpshttp://podslearn.genetics.iplantcollaborativeutah.orgedu/wikicontent/displaypharma/atmmansnips/PLINK
The following apps have at one point been used within our workflow, but are no longer included. They can be explored via the links below:
antepi https://pods.iplantcollaborative.org/wiki/display/DEapps/AntEpiSeeker+2.0
borda count https://pods.iplantcollaborative.org/wiki/display/DEapps/Borda+Count
random jungle (which has since been turned into a program called ranger) https://pods.iplantcollaborative.org/wiki/display/DEapps/Random+Jungle+2
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This tool is still in development and we are testing it currently. If you notice any issues or have any comments we would greatly appreciate them! |