GNU grep 3.1-2
The grep command searches one or more input files for lines containing a match to a specified pattern.
Quick Start
- To use GNU grep 3.1-2, import your data in any text format.
- Resources: https://www.gnu.org/software/grep/manual/grep.html
Test Data
Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> grep
Input File(s)
Use NC_101473.fa from the directory above as test input.
Parameters Used in App
When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.
- Use these parameters within the DE app interface:
- enter ">" in the text to search field
Output File(s)
Expect grep_output.txt as output. F