2012 07 27 RNASeq Workshop at UA

Goal

To provide an interactive, hands-on training of iPlant Tools and Services so that participants can begin to use iPlant cyberinfrastructure in their research, with a specific focus on RNA-Seq.

Pre-Workshop Homework

1. Please test your iPlant credentials to ensure you have access. You can log-in from user.iplantcollaborative.org, click the button "iPlant Login"

• Once authenticated, click the "My Services" link
• Under "My Services" please ensure you have access to: Atmosphere and the Discovery Environment. Enter "RNASeq" when prompted for a justification for your Atmosphere allocation. You can also request access to other services at this link
• If you have account problems, please email support@iplantcollaborative.org

2. Please check your email and this wiki prior to the workshop, as this is the way we will communicate any important changes.

3. Windows users, make sure you have Java installed (http://java.com/en/download/installed.jsp)

Workshop Notes

Here are a few important links that you may wish to refer to during and after the workshop:

Account/Password Problems

• user.iplantcollaborative.org 

iPlant Help and Discussion Forums

• forums.iplantcollaborative.org/

General iPlant Support Issues

• support@iplantcollaborative.org 

iPlant Privacy (And other) policies - "Your Data are Your Data"

• www.iplantcollaborative.org/privacy
• www.iplantcollaborative.org/about/data-set-hosting
• www.iplantcollaborative.org/about/general-usage-policy

Agenda

Attendees