2014 Events

2014 Events

Title

Type

Date

Location

iPlant Contact

Institution Contact

Notes

Title

Type

Date

Location

iPlant Contact

Institution Contact

Notes

CANCELLED: Tucson Software Carpentry Bootcamp

Workshop

Jan 6-7

Tucson, AZ

N. Merchant

Greg Wilson

In combination with Winter Breeding Institute

Winter Plant Breeding Institute

Workshop

Jan 6-10

Tucson, AZ

S. Goff

B. Walsh, A. Randall

Workshop: Bioinformatics Module, Jan. 8-10
Trainers: Steve Goff, Nirav Merchant

SeedSeq/Digital Seed Bank Meeting

Meeting

Jan 9-10

San Diego, CA

D. Ware

Hannes Dempewolf
Global Crop Diversity Trust
Platz der Vereinten Nationen 7 53113 Bonn, Germany
www.croptrust.org

Attendees: Steve Goff, Doreen Ware

PAG XXII (website)
PAG XXII Planning

Conference

Jan 11-15

San Diego, CA

J. Williams

D. Scherago

Full iPlant@PAG
*Attendees: *Steve Goff, Doreen Ware, Dan Stanzione, Jason Williams, Naim Matasci, Ramona Walls, Roger Barthelson, Dave Micklos, Josh Stein, Damian Gessler, Nirav Merchant.

ARFP Research Fellow Mtg

Meeting

Jan 16

Tucson, AZ

S. Goff

V. Lau

Location: Arizona Inn
2200 E Elm St.
Tucson, AZ   85719
Time: Jan 16, 2014, 8:30 AM - 11 AM
Purpose: The main emphasis of our program is on team science.  Our fellows wish to experience and hear  about your team science program, how it is organized, managed and sustained and what lessons they can learn from your successful program.

IRRI-iPlant Mtg

Meeting

Jan 17

Tucson, AZ

S. Goff

IRRI Visitors: Ramil Mauleon, Ken McNally, Nicolai Alexandrov

Purpose: to discuss the 1000 rice genomes that IRRI would like iPlant to host for public research.  Mtg included:  Nicole, Nirav, Naim, Martha, Roger, Edwin

EAGER: Report on International Data Exchange Requirements (RIDER) Adv Cmte

Meeting

Jan 30-31

Washington, DC

S. Goff

Jill Gemmill
zelda@clemson.edu   

RIDER = Report on International Data Exchange Requirements


TSW Linfield College

Workshop

Jan 31-Feb 1

McMinnville, OR

J. Williams

Sam Fox

2-day Tools and Services Workshop

Half-Day Scientific Meeting

UA Meeting

Feb 12

Tucson, AZ

S. Goff

Anne M. Wertheimer,
PhDScientific Manager,Biology of Aging Research
Arizona Center on Aging
Research Assistant Professor
Dept. of Medicine, Sect. Geriatrics 
Ph: 520-626-5850  
awertheimer@aging.arizona.edu 

 

Population and Community Ontology Collaborative Exchange + Biological Collections Ontology Workshop

Workshop

Feb. 18-20

Tucson, AZ

R. Walls

Judy Logue/Josie A

Sponsored by the Phenotype RCN and the Interoperable Information Infrastructure for Biodiversity Research (I3B) EAGER

Phenotype RCN

Meeting

Feb 20-23

Tucson, AZ

R. Walls; T. Lee

E. Huala

iPlant hosted meeting at Biosphere2

Invited Talk at TGAC

Presentation

Feb. 28

Norwich, UK

J. Williams

Rubina K.

Presentation:  Jason Williams, The iPlant Collaborative – A Unified Cyberinfrastructure for the New Life Science

iPlant/CoGe Workshop

Workshop

Mar 3-4

Wageningen, NL

E. Lyons, J. Williams

E. Schranz

Workshop: The iPlant Collaborative and CoGe

iPlant Getting Started

Webinar

Mar 10

N/A

J. Williams

 

Monthly Webinar for new account holders

Maize Genetics

Conference

Mar 13-16

Beijing, CHINA

D. Ware 

A. Stapleton

Attendees: Ann Stapleton, Doreen Ware, Jason Williams 
Poster:  The iPlant Collaborative 

Maize Genetics

Workshop

Mar 14

Bejing, CN

J. Williams

 

Workshop: An Introduction to the iPlant Collaborative 

Big Data in Biology

Meeting

Mar 23-25

San Francisco, CA

D. Ware, M. Schatz, D. Stanzione

D. Ware

Presentations:
Dan Stanzione, iPlant: Cyberinfrastructure for 21st Century Biology, 9:30 AM, 3/24/14 Databases & Clouds session
Micheal Schatz, Scalable Solutions for NGS Analysis, 9:30 AM, 3/24/14 Databases & Clouds session

Train the Trainers

Training

Mar 25

Davis, CA

J. Williams

 

Trainees: Mike Covington, Joe Fass, Monica Britton, Sebastian Reyes Chin-Wo, Raj Nandety, Aashish Ranjan, Michelle Stitzer

TSW@UC Davis

Workshop

Mar 26-27

Davis, CA

J. Williams  

Monica Britton, Ian Korf

Trainers: Jason Williams, Roger Barthelson, UCD newly-trained trainers

CUREnet

Meeting

Mar 31- Apr 2

Cold Spring Harbor, NY

D. Micklos, J. Williams

D. Micklos

Presentations:
Dave Micklos,  chair of panel on Infrastructure and Data for Large-Scale Collaborations
Dave Micklos, DNA Subway: An Infrastructure for Distributed Student Research on Genomics, DNA Barcoding, and RNA-Seq

GSC 16 - Genomics Standards Consortium

Soc. Conference plus Hackathon

Mar 31 - Apr 2

Oxford, UK

R. Walls

Neil Davies, Dawn Field

Hackathon for the Biological Collections Ontology during the semi-annual GSC meeting

Bioinformatics and Computation Biology Lecture Series

Presentation

Apr 2

Ames, IA

S. Goff

R. Jernigan, Dir.; MJ McCunn, admin; Mary Jane McCunn 
L.H. Baker Center for Bioinformatics and Biological Statistics 
112 Office and Laboratory 
Iowa State University 
Ames, IA  50011 
Phone:  515-294-7278 
FAX:  515-294-3841

Presentation:  Steve Goff, Using the iPlant cyberinfratstructure platform to explore the potential connection between protein metabolism, hybrid vigor, and cellular aging 

Moorea Avatar Meeting

Meeting

Apr 3-4

Oxford, UK

R. Walls

Neil Davies, Dawn Field, Neo Martinez

Presentation: Ramona Walls, Supporting international collaborations iPlant style, providing input on use of iPlant's infrastructure for the Moorea AVATAR project.

Plant Sciences Inst Adv Board

Meeting

Apr 4

Ames, IA

S. Goff

Deanna Brill (admin), Pat Schnable (dept head)

 

Field-based High Throughput Phenotyping

Workshop

Apr 7-10

Maricopa, AZ

R. Walls

Jeffery White

A three day workshop on field phenomics.
Presentation: Ramona Walls, Using iPlant for plant phenomic data 

Internet2 Global Summit

Panel Presentation

Apr 9

Denver, CO

S. Goff

Dan Taylor, Director, Internet2

Session Title: "Using Big Data to Revolutionize Agriculture Worldwide" *scheduled for *Wednesday, April 9 from 1:15pm-2:30pm.

Get Started with iPlant

Webinar

Apr 11

N/A

J. Williams

 

Monthly Webinar for New Account Holders

NSF (RCN) Incubator: Network for Integrating Bioinformatics into Life Sciences Education (NIBLSE)

Meeting

Apr 17-18

Omaha, NB

J. Williams

Mark Pauley

Attendees: Jason Williams, Sally Elgin (iPlant SAB member)

Software Carpentry Workshop

Workshop

Apr 27-30

Toronto, ON

J. Williams

 

Attendees: Jason Williams, John Fonner, Jonathan Strootman

BioIT World Conference & Expo

Conference

Apr 29- May 1

Boston, MA

J. Carson

 

Attendees: James Carson to attend and represent iPlant and TACC

Datasphere

Workshop

May 5-6

Biosphere2, Oracle, Arizona

N. Merchant, M. Narro

Brian Heidorn, U. Arizona

NSF-funded workshop (~30) to explore the software and cyberinfrastructure needs of the biodiversity and environmental sciences, and address how a software institute might advance these fields.  
Workshop report

Plant Trait Semantics at iDiv

Workshop

May 6-7

Leipzig, Germany

R. Walls

Jens Kattge

Plant Trait Semantics in the Context of Biodiversity Research: Concepts and Opportunities for Interoperability.
Presentation: Ramona Walls, Plant traits in iPlant and Plant Ontology 

Software Carpentry Workshop

Workshop

May 12-13

Cold Spring Harbor, NY

J. Williams

 

iPlant will sponsor a two-day SC workshop at CSHL
Announcement Link

WiNGS Workshop

Workshop

May 12-13

Charlotte, NC

N. Matasci

Ann Loraine

Trainer: Naim Matasci, Naim will teach a class on using R for NGS. 

Get Started with iPlant

Webinar

May 14

Online

J. Williams

 

Monthly iPlant orientation webinar

OpenStack Summit

Conf

May 12-16

Atlanta, GA

E. Skidmore

 

Attendees: Edwin Skidmore, Steve Gregory
Conference website/program

iPlant Data Clinic

Workshop

May 20

Reno, NV

R. Barthelson, U. Hilgert

Christie Howard

Trainer: Roger Barthelson, Roger will lead a tour of iPlant and help a group of local faculty work through RNA-Seq data. 

Genomics in Education Workshop

Workshop