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PAG XXI

PAG XXI

Pre-iPlant Workshop

Date: January 11th, 2013 - 1PM-7:00PM

Location: Executive 3A/3B - Sheraton San Diego Hotel and Marina http://www.sheratonsandiegohotel.com/ - 6.8 miles from Town and Country (across the street from airport)

Current agenda and registration info: http://www.iplantcollaborative.org/tsw-sd

Presentations and Posters for iPlant Events at PAG

Date

Time

Location

iPlant Workshop
Presentation Title

Speaker(s)

Jan 11

12:00 AM

Windsor Room

Animal Annual Project Director Meeting
iPlant's Cyber Infrastructure for the Life Science Community

Doreen Ware

Jan 12

10:20 AM - 12:30 PM

California Room

DNA Subway: Genomics, DNA Barcoding, and RNA-Seq - Bringing Cutting-Edge Biology into the Classroom

Jason Williams

Jan 12

10:20 AM - 12:30 PM

California Room

DNA Subway Worskhop
Bringing General Genetics Students onto the Red Line:
One Lab Period Lessons for New Genomics Students

Judy Brusslan, Cal State Long Beach

Jan 12

10:20 AM - 12:30 PM

California Room

DNA Subway Worskhop
Annotation and Analysis of Gene Families in Glycine max using DNA Subway

Ronald Frank, Missouri University of Science and Technology

Jan 13

9:25 AM

Golden West

Plant Phenotypes
iPlant's cyber infrastructure for plant phenotypes

Nirav Merchant

Jan 15

10:20 AM - 12:30 PM

California Room

iPlant Workshop
iPlant State of the Collaboration

Steve Goff, iPlant PI

Jan 15

10:20 AM - 12:30 PM

California Room

iPlant Workshop
CartograTree for Tree Biology

Jill Wergrzyn, UC Davis

Jan 15

10:20 AM - 12:30 PM

California Room

iPlant Workshop
Accelerating livestock genomics with iAnimal

James Koltes, Iowa State University

Jan 15

10:20 AM - 12:30 PM

California Room

iPlant Workshop
RNA-Seq analysis in the Discovery Environment

Richard Barker, UW Madison

Jan 15

10:20 AM - 12:30 PM

California Room

iPlant Workshop
iPlant Power Users

Mike Covington, UC Davis

Jan 15

10:20 AM - 12:30 PM

California Room

iPlant Workshop
iPlant Collaborator: BioExtract

Carol Lushbough, South Dakota State University

Jan 15

1:30 PM - 3:40 PM

California Room

iPlant Semantic Web Platform: SSWAP

Damian Gessler, iPlant; Hans Vasquez-Gross, UC Davis

iPlant-related and Collaborator Talks at PAG

Date

Time

Location

Workshop
Presentation Title

Speaker(s)

Jan 12

9:15 AM

Golden West

Evolution of Genome Size
Architecture and Evolution of a Minimal Plant Genome

Eric Lyons, UA iPlant

Jan 12

10:20 AM

Royal Palm Salon 1-2

Arthropod Genomics
Arthropod genome and transcriptome assembly and annotation utilizing iPlant resources

Roger Barthelson, UA iPlant

Jan 12

11:55 AM

Royal Palm Salon 5-6

Managing Crop Phenotype Data
Managing Phenotyping Data in the Integrated Breeding Platform

Graham McLaren, Generation Challenge Programme

Jan 12

2:00 PM

Sunset

Poultry 1
Maximizing the utility of avian genomes with comparative genomics

Eric Lyons, UA iPlant

Jan 12

4:50 PM

Sunrise

Non-Seed Plants
One Thousand Land Plant Transcriptomes: Challenges, Developments, and Status

Gane Ka-Shu Wong, UAlberta

Jan 13

8:30 AM

San Diego

Cattle/Sheet/Goat 2
The 1000 bull genomes project - toward genomic selection from whole genome sequence data in dair and beef cattle

1000 Bull Genomes Consortium

Jan 13

8:45 AM

Golden West

Plant Phenotypes
Ontological descriptions of phenotypes, with a case study in maize

Ramona Walls

Jan 14

2:10 PM

Pacific Salon 6-7, 2nd Fl

Intl Arabidopsis Informatics Consortium
Recent Developments at COGE and EPIC

Eric Lyons, UA iPlant

Jan 14

2:35 PM

Royal Palm Salon 4,5,6

Generation Challenge Program
Integrated Breeding Workflow V1

Graham McLaren

Jan 15

11:05 AM

Sunset

Plant and Animal Genome Paleogenomics
Pan-angiosperm Syntenic Mappings Using Key Reconstructed Ancestral Genomes

Eric Lyons, UA iPlant

Jan 15

4:20 PM

Pacific Salon 3

Gene Expression Analysis
Gene Expression in Inbred and Hybrid Mice, Young and Old

Stephen A Goff, Qi Cai, Janko Nikolich-Zugich, David Galbraith

Jan 16

1:30 PM

Golden West

GMOD 
GBrowse_syn

Sheldon McKay

Jan 16

3:45 PM

Golden West

GMOD
Galaxy

Jennifer Hillman-Jackson

Connecting with iPlant

This year at PAG 2013, iPlant is offering individual consultations to assist you with using iPlant cyberinfrastructure in your research. To make an appointment for individual user consultation: http://www.iplantcollaborative.org/forms/individual-user-consultations-pag-2013-request-form. We will schedule you for a half-hour consultation with a staff member best suited to help you and notify you before PAG so that you can confirm your appointment.

Twitter: @iPlantCollab #iPlantPAG

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