2014 03 14 iPlant Mini-Workshop 2014 Maize Meeting
Organizers | |
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Trainers | Jason W |
Date | Friday Mar 14, 2014 |
Location | Conference Room 308 4:00-6:30 (16:00-18:30) |
Workshop Checklist ?????
1. Wi-Fi enabled CHARGED laptop and power supply:
The conference room has limited charging/power - so please charge your laptop ahead of time ?????,??????
Please have an up-to-date web browser (Recommended Firefox or Safari ) (?????????????????????JAVA)
2. iPlant Account (????????????)
Get your free account at http://user.iplantcollaborative.org. Once you have your account, go to https://user.iplantcollaborative.org/dashboard/ and under Available Services, request access to Atmosphere. Indicate that you are attending a workshop when you are asked for justification.
3. Download VNC Viewer (?? VNC Viewer)
Download the DMG (for MAC) or exe (for PC): http://www.realvnc.com/download/viewer/
Workshop Links ???????
Here are a few important links that you may wish to refer to during and after the workshop:
Account/Password Problems
iPlant Help and Discussion Forums
General iPlant Support Issues
iPlant Privacy (and other) policies - "Your Data is Your Data"
Workshop Program (Friday, Mar 14) ? ????
Time | Activity | Slides | Handout/Instructions | Links/Resources |
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16:00 | Welcome, overview of iPlant |
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16:20 | Conducting and analysis in the Discovery Environment |
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16:40 | Managing Data with iPlant |
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17:00 | Cloud Computing with Atmosphere |
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17:20 | Choose an activity |
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17:20 | A) Starting RNA-Seq using Tuxedo Workflow |
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| B) Starting GWAS with GBS |
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| C) Explore on your own |
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17:50 | Education - DNA Subway - Green Line and Maize Annotation for Undergrads |
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18:00 | Wrap up and where to get help |
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