iPlant Software Integration Tutorial, Iowa State University
Organizers | |
|---|---|
Administrative Assistance | |
Date | May 13-14, 2013 |
Meeting Location | 124 Kildee Hall |
Particpants |
Resources
JOIN.ME SCREEN SHARE https://join.me/463-627-161 (Updated throughout the session)
This Wiki: http://bit.ly/10tsuz2
Recommended Software
Browser (in order): Firefox, Safari, Chrome
SSH Client: PuTTY (Windows) or built-in client (Mac OS X/Linux)
Java 1.7+ runtime installed
Goals of this Workshop
Students will gain understanding of iPlant cyberinfrastructure offerings
Students will understand how to integrate scientific code into the iPlant infrastructure using
Atmosphere
Discovery Environment
Foundation API
Students will integrate selected tools using the DE and API
Agenda
Day One
Time | Session | Misc |
|---|---|---|
09:00-09:20 | Introduction to the iPlant Project |
|
09:20-09:30 | Sort into work groups | |
09:30-09:40 | Sign up for TACC accounts | |
09:40-10:00 | Using iPlant Technologies (DE and API) | |
10:00-10:15 | Break | Whew! |
10:15-10:30 | Using iPlant Technologies (Atmosphere) | |
10:30-12:00 | Tutorial: Integrating tools into the iPlant DE | |
12:00-1:00 | Lunch |
|
1:00-3:30 | Students perform DE tool integration | |
3:30-4:00 | Student group demo session |
Day Two
Time | Session | Misc |
|---|---|---|
9:00-9:15 | Foundation API Overview |
|
9:15-10:00 | Introduction to Lonestar and iRODS icommands | |
10:00-10:10 | Break |
|
10:10-12:00 | Foundation API Usage Tutorial | |
12:00-1:00 | Lunch |
|
1:00-2:00 | Foundation API Development Tutorial | |
2:00-3:30 | Students perform API tool integration |
|
3:30-4:00 | Tying the API to the Discovery Environment | Demonstration |