Update - 5-1-15

Update - 5/1/15

The wiki was down for class this week, but since I made a page for an update I suppose I should put something on it.

My script to format the Bismark Methylation Extractor output to be imported into CoGe is done, and it works! It would be nice to set it up to pass it the filename to be converted as a command line argument. That way you wouldn't have to give it the name manually and could queue up multiple files at the same time. Probably not very hard, and something I could do in the future.

Unexpected, but logical, consequence of processing the files like this: The resulting reformatted files are quite small.

The script can be found here on my github.

All that remains is to load the files into CoGe and take a look!