TR120227

Agenda

Action Items from 1/30 & 2/6:

  1. Jamie  to document outcome of discussion of multiple reconciliations and talk to Naim about implementation.  Aim is to have a functional interface by May 1st.
  2. Jim to inquire with John Kerry about assembling some quick-and-dirty 1KP test data for scalability tests.
  3. Jamie to look at other many-species reconciliation datasets.
  4. Phylodog installation at TACC http://pbil.univ-lyon1.fr/software/phyldog/ 
  5. Jamie to share status of manuscript for TRON ontology (target: Frontiers in Bioinformatics and Computational Biology special focus issue on biological ontologies

1. Report from site visit (Naim)

2. Update from 1KP

3. Support for the multiple reconciliation comparison use cases

  • Discussion from last meeting.
  • Mockups of how to represent multiple reconciliations and what changes they will require to the TR code at:

4. Propose a GSoC project for this year?

5. Around the room.

Action items