Tools and Software list

The purpose of this page is to keep track of tools and software that the community might want to see added to the Discovery Environment.

The goal is also to provide an evaluation in terms of usefulness, rather than going into the technical details. This should be a place for discussion, so please add and edit freely

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Some suggestions from Ann's emails:

• http://cran.r-project.org/web/packages/PHYLOGR/index.html, which implements some of the more statistically-based methods.
• http://www.evolution.rdg.ac.uk/BayesTraits.html, as it includes good methods for analyzing discrete traits (which are common).
• http://www.phylodiversity.net/phylocom/