maker2zff
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Pulls out MAKER gene models from the MAKER GFF3 output and convert them into ZFF format for SNAP training.
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- To use maker2zff, import your maker results in gff3 format.
- Resources: http://gmod.org/wiki/MAKER_Tutorial_2012#MAKER_Accessory_Scripts
Test Data
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Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> maker. |
Input File(s)
Use contig-dpp-500-500.gff from the directory above as test input.
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Expect genome.ann and genome.dna as output. For the test case, the output files you will find in the example_data directory are named genome.ann and genome.dna.