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When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the section below.


Use these parameters within the DE app interface:

    • MODE - union
    • feature type - exon
    • feature attribute - gene_id
    • default for the rest

Output File(s)

Expect a tab delimited file as output. For the test case, the output file you will find in the example_data directory is named FeatureCounts.

Related Tutorials

fRNAkenseq (HTseq-with-BAM-input) Tutorial

Tool Source for App