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The grep command searches one or more input files for lines containing a match to a specified pattern.



Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> grep


Input File(s)

Use NC_101473.fa from the directory above as test input.


  • Use these parameters within the DE app interface:
  • enter ">" in the text to search field

Output File(s)

Expect a FILE grep_output.txt as output. For the test case, the output file you will find in the example_data directory is named OTHER THINGF

 Tool Source for App