GNU grep 3.1-2

The grep command searches one or more input files for lines containing a match to a specified pattern.

Quick Start

Test Data

Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> grep


Input File(s)

Use NC_101473.fa from the directory above as test input.

Parameters Used in App

When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.

  • Use these parameters within the DE app interface:
  • enter ">" in the text to search field

Output File(s)

Expect grep_output.txt as output. F

 Tool Source for App