chloroExtractor 1.0.9

chloroExtractor 1.0.9

Quick StartTo use chloroExtractorimport your paired-end data in FASTQ format

Test Data

Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> chloroextractor

Input File(s)

Use 1000000_SRR5216995_1.fastq and 1000000_SRR5216995_2.fastq  from the directory above as test input.

Parameters Used in App

When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.

  • Use these parameters within the DE app interface:
    • Leave all parameters as default.

Output File(s)

Expect a folder called out as output. There will be many files in this folder. 

Tool Source for App