BEDTools genomeCoverageBed
BEDTools genomeCoverageBed
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Compute the coverage of a feature file among a genome.
Quick Start
- To use BEDTools genomeCoverageBed, import your data in BED format.
- Resources: http://code.google.com/p/bedtools/
Test Data
Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> Bedtools.
Input File(s)
Use b.bed and my.genome from the directory above as test input.
Parameters Used in App
When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.
- Default parameters only, no further configuration needed.
Output File(s)
Expect bedtools_genomecov_output as output.