Community rating: ?????
General Linear Model analysis without population structure
Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> glm.
Use mdp_genotype.hmp.txt and mdp_traits.txt from the directory above as test input.
Parameters Used in App
When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.
- Default parameters only, no further configuration needed.
Expect two text files as output. For the test case, the output files you will find in the example_data directory is named glm1.txt and glm2.txt.