add column to file

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Last updated: Oct 10, 2014 by lgardineVersion comment
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add column to file

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For use in mutant identification pipeline (Workflow:Identification of unique homozygous SNPs in mutant) to label MUTANT PARENT file before concatenation i.e. adds label column to file

Quick Start

  • To use add column to file, import your data in SNP file VarScan format.

Test Data

Test data for this app appears directly in the link: http://de.iplantcollaborative.org/dl/d/B624115B-A994-4C89-AE04-F1AD32DF330D/RIL25.snp

Input File(s)

Use the link above as test input.

Parameters Used in App

When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.

  • Default parameters only, no further configuration needed.

Output File(s)

Expect a SNP file in VarScan format with an additional label column as output. For the test case, the output file you will find at: http://de.iplantcollaborative.org/dl/d/762D8CC3-95F2-4604-AFFC-053119716E07/Prepared.snp