Ray-2.3.1
- de-confluence
- Roger Barthelson
- Branden Lau (Unlicensed)
Owned by de-confluence
Ray-2.3.1
Community rating: A1 fantastic
Parallel Assembler for Illumina reads.
Quick Start
- To use Ray-2.3.1, import your sequencing files in a directory containing all your reads in fastq format.
- Resources: http://denovoassembler.sourceforge.net
Test Data
Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> Ray2.2.0
Input File(s)
Use the entire "Reads" directory in the example_data section.
Parameters Used in App
When the app is run in the Discovery Environment, use the following parameters with the above input file(s) to get the output provided in the next section below.
- Default parameters only, no further configuration needed.
Output File(s)
Expect an output file with many files, including a scaffolds file and a contig file as output.