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Rationale and background
unpigz-2.3.4 (Parallel Implementation of Gzip) is a fully functional replacement for gzip that exploits multiple processors and multiple cores to the hilt when uncompressed
- A CyVerse account. (Register for an CyVerse account here - user.cyverse.org)
- Mandatory arguments
- Input - One or more files that needs to be uncompressed
- Output folder - Name of the output folder where the compressed files will be placed
- Optional Parameters:
- Compress faster : Indicates the fastest uncompression method (less compression)
- Compress better : indicates the slowest uncompression method (best compression)
The following test data are provided for testing HISAT2 in here - /iplant/home/shared/iplantcollaborative/example_data/uncompress_files_with_gunzip:
Successful execution of the unpigz will create a directory named Output. The directory will contain uncompressed file or files