gffread-2.2.1 convert between GFF3 and GTF2

convert GFF3 to GTF2 or GTF2 to GFF3

Quick Start

To use gffread-2.2.1 convert between GFF3 and GTF2, import your data in either GTF2 or GFF3 format
Resources: http://ccb.jhu.edu/software/stringtie/gff.shtml

Test Data

Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data ->gffread_convert_gff_gtf

Input Files

Use:

chloroplast_Arabidopsis_thaliana_thale_cress_dsgid7046.gff

Parameters

Check the box 'convert to GTF2

Output Files

This analysis should generate one input file:

gffread.gff

Tool Source for App

http://ccb.jhu.edu/software/stringtie/gff.shtml