Structure 2.3.4
Structure 2.3.4
The program structure is a free software package for using multi-locus genotype data to investigate population structure. Its uses include inferring the presence of distinct populations, assigning individuals to populations, studying hybrid zones, identifying migrants and admixed individuals, and estimating population allele frequencies in situations where many individuals are migrants or admixed. It can be applied to most of the commonly-used genetic markers, including SNPS, microsatellites, RFLPs and AFLPs.
Quick Start
Test Data
Test data for this app appears directly in the Discovery Environment in the Data window under Community Data -> iplantcollaborative -> example_data -> structure -> small_dataset
Input File(s)
Use
sample_data
Parameters Used in App
provide the mainparameters in the 'Main parameters' field
provide the extraparameters in the 'Extraparameters' field
provide a prefix for the output file(s) in the 'output file name' field–output was used in the example
Output File(s)
This analysis above will produce one output file: output_f