/
Using Cyberduck for Uploading and Downloading to the Data Store

Using Cyberduck for Uploading and Downloading to the Data Store

Sept 16, 2019

 

 

 

 

 

Step 2: Configure Cyberduck for use with the Data Store (one-time only)

These instructions are for configuring the iRODS Connective Profile for the Data Store, both for CyVerse user account access and for anonymous access, if you do not have a CyVerse user account.

This configuration is for the CyVerse main Data Store. To connect Cyberduck to a federated or dedicated resource server, please contact your network administrator.

  1. Click 

    Cyberduck app icon
    Cyberduck app icon

    to open Cyberduck.

  2. Click , which contains preconfigured settings for using Cyberduck with the CyVerse Data Store.

  3. Click to open the downloaded CyVerse Data Store.cyberduckprofile file. 

  4. Verify CyVerse Data Store is displayed in the first field. 

  5. In the Nickname field, enter data.cyverse.org – iRODS.

  6. Create the connection:

    • In the Server field, enter data.cyverse.org.

    • In the Port field, enter 1247.

    • To create the connection with your CyVerse user account for login:

      1. Enter your CyVerse user name in the Username field.

      • Verify your username is added to the URL field, as shown above.
        Example: irods://yourusername@data.cyverse.org.

    • To create an anonymous connection so you can access public data without a CyVerse user account:

      1. Click the Anonymous Login checkbox.

      2. Verify anonymous is displayed in the Username field.

The remaining fields are populated.

7. Click in the Transfer Files drop-down list and select Open multiple connections.

8. Close the window.

For information on configuring your Cyberduck preferences, see the Cyberduck Preferences Help page on the Cyberduck website.

Using Cyberduck

Logging In

  1. If necessary, click  

      to open Cyberduck.

  2. In the Cyberduck window, click the bookmark to use and then click Open Connection.

  3. In the drop-down list, click the repository to use.

  4. Log in to Cyberduck:

    • If logging in with your CyVerse account, enter your CyVerse username and password.

    • If logging in without a CyVerse account, click the Anonymous Login checkbox.

  5. Click Connect.

Downloading a file or folder from the Data Store (CyVerse users and anonymous users)

  1. Click the file or folder to download.

  2. Click the Cyberduck File menu and then click New Download. The file is downloaded to your default download folder.

    • To change your default download folder, click

      , click Download Folder and select the new default download folder.

  3. To navigate to a different folder (for example, to download a file from the Community Data folder):

    1. Click the Cyberduck Go menu and then click Go to Folder.

    2. Enter the path to the folder (you may want to copy the path to the folder displayed in the DE Data window's Viewing field).
      For example, to go to the Data Store Shared folder, enter /iplant/home/shared.

    3. Click Go.

Uploading a file or folder to the Data Store (CyVerse users only)

See Create Account on the CyVerse website.

  1. Click the Cyberduck File menu and then click Upload. 

  2. Click the file or folder to upload and then click Upload. The item is uploaded to your Home folder.

Need help?

For assistance installing and configuring Cyberduck for use with the Data Store, please contact CyVerse Support, or see the Cyberduck Preferences Help page for more information on installation.

For questions on using Cyberduck, please see the Cyberduck Help manual, the Cyberduck FAQs, or contact Cyberduck Support.

Unable to render {include} The included page could not be found.